Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc7Q9D541 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc7Q9D541 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc7Q9D541 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Gm27389-201ENSMUST00000183622 195 ntBASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc7Q9D541 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Gm18032-201ENSMUST00000222541 538 ntBASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 App-207ENSMUST00000227737 2827 ntBASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc7Q9D541 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Gm6433-201ENSMUST00000118634 875 ntBASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Gm44430-201ENSMUST00000203376 995 ntBASIC18.92■□□□□ 0.62
Ccdc7Q9D541 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms