Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Gm18666-201ENSMUST00000190039 958 ntBASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Gm9731-201ENSMUST00000209480 747 ntBASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1bQ9D0N7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chaf1bQ9D0N7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1bQ9D0N7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Chaf1bQ9D0N7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms