Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm8825-201ENSMUST00000182565 998 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm4518-201ENSMUST00000182638 718 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Nip7Q9CXK8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nip7Q9CXK8 Gm25911-201ENSMUST00000157621 56 ntBASIC20.11■□□□□ 0.81
Nip7Q9CXK8 Gm5682-201ENSMUST00000173402 505 ntBASIC20.11■□□□□ 0.81
Nip7Q9CXK8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nip7Q9CXK8 Gm10175-201ENSMUST00000086013 645 ntBASIC20.11■□□□□ 0.81
Nip7Q9CXK8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nip7Q9CXK8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nip7Q9CXK8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nip7Q9CXK8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nip7Q9CXK8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nip7Q9CXK8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nip7Q9CXK8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nip7Q9CXK8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nip7Q9CXK8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nip7Q9CXK8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nip7Q9CXK8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nip7Q9CXK8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nip7Q9CXK8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Nip7Q9CXK8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Nip7Q9CXK8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nip7Q9CXK8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nip7Q9CXK8 Gm11764-201ENSMUST00000120221 623 ntBASIC20.08■□□□□ 0.81
Nip7Q9CXK8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.08■□□□□ 0.81
Nip7Q9CXK8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms