Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc3Q9CW03 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Smc3Q9CW03 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.08■□□□□ 0.64
Smc3Q9CW03 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.08■□□□□ 0.64
Smc3Q9CW03 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Smc3Q9CW03 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc3Q9CW03 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.07■□□□□ 0.64
Smc3Q9CW03 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc3Q9CW03 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.06■□□□□ 0.64
Smc3Q9CW03 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Gm11336-201ENSMUST00000118168 334 ntBASIC19.06■□□□□ 0.64
Smc3Q9CW03 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.06■□□□□ 0.64
Smc3Q9CW03 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.06■□□□□ 0.64
Smc3Q9CW03 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc3Q9CW03 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Gm37055-201ENSMUST00000191866 133 ntBASIC19.05■□□□□ 0.64
Smc3Q9CW03 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.05■□□□□ 0.64
Smc3Q9CW03 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.04■□□□□ 0.64
Smc3Q9CW03 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Gm13436-201ENSMUST00000120418 567 ntBASIC19.04■□□□□ 0.64
Smc3Q9CW03 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms