Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.82■□□□□ 0.28
Q9CQC3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.82■□□□□ 0.28
Q9CQC3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.82■□□□□ 0.28
Q9CQC3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q9CQC3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Q9CQC3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Q9CQC3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Q9CQC3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.81■□□□□ 0.28
Q9CQC3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Q9CQC3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.81■□□□□ 0.28
Q9CQC3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.81■□□□□ 0.28
Q9CQC3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Q9CQC3 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.81■□□□□ 0.28
Q9CQC3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Q9CQC3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.81■□□□□ 0.28
Q9CQC3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.81■□□□□ 0.28
Q9CQC3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.81■□□□□ 0.28
Q9CQC3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Q9CQC3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Q9CQC3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.81■□□□□ 0.28
Q9CQC3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Q9CQC3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q9CQC3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.8■□□□□ 0.28
Q9CQC3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Q9CQC3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Q9CQC3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Q9CQC3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Q9CQC3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Q9CQC3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Q9CQC3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Q9CQC3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.8■□□□□ 0.28
Q9CQC3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Q9CQC3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.8■□□□□ 0.28
Q9CQC3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q9CQC3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Q9CQC3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Q9CQC3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.79■□□□□ 0.28
Q9CQC3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.79■□□□□ 0.28
Q9CQC3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.79■□□□□ 0.28
Q9CQC3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q9CQC3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms