Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf3Q99LI7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cstf3Q99LI7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Gm36967-201ENSMUST00000193814 266 ntBASIC15.66■□□□□ 0.1
Cstf3Q99LI7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.66■□□□□ 0.1
Cstf3Q99LI7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.66■□□□□ 0.1
Cstf3Q99LI7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf3Q99LI7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms