Protein–RNA interactions for Protein: Q99KR6

Rnf34, E3 ubiquitin-protein ligase RNF34, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf34Q99KR6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf34Q99KR6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Gm15039-201ENSMUST00000118914 875 ntBASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Actl10-202ENSMUST00000226583 1501 ntBASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf34Q99KR6 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf34Q99KR6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.39■□□□□ 0.38
Rnf34Q99KR6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf34Q99KR6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Rnf34Q99KR6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Gm10653-202ENSMUST00000139570 835 ntBASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Gm20760-201ENSMUST00000179197 648 ntBASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Prob1-201ENSMUST00000097619 3021 ntBASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf34Q99KR6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms