Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd2Q99JR8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcd2Q99JR8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Smarcd2Q99JR8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcd2Q99JR8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcd2Q99JR8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcd2Q99JR8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcd2Q99JR8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcd2Q99JR8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm8825-201ENSMUST00000182565 998 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm4518-201ENSMUST00000182638 718 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd2Q99JR8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Gm23935-201ENSMUST00000102303 57 ntBASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Gm24270-201ENSMUST00000102326 57 ntBASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Gm4995-201ENSMUST00000117247 432 ntBASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Gm24245-201ENSMUST00000157318 57 ntBASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Gm27646-201ENSMUST00000183989 110 ntBASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd2Q99JR8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Gm11764-201ENSMUST00000120221 623 ntBASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd2Q99JR8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms