Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Gm5643-201ENSMUST00000117081 966 ntBASIC16.37■□□□□ 0.21
Cdk9Q99J95 Gm17661-201ENSMUST00000170317 270 ntBASIC16.37■□□□□ 0.21
Cdk9Q99J95 Gm37292-201ENSMUST00000192062 758 ntBASIC16.37■□□□□ 0.21
Cdk9Q99J95 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Cdk9Q99J95 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk9Q99J95 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cdk9Q99J95 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.36■□□□□ 0.21
Cdk9Q99J95 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Gm18666-201ENSMUST00000190039 958 ntBASIC16.36■□□□□ 0.21
Cdk9Q99J95 Gm37025-201ENSMUST00000195159 829 ntBASIC16.36■□□□□ 0.21
Cdk9Q99J95 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk9Q99J95 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.35■□□□□ 0.21
Cdk9Q99J95 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Cdk9Q99J95 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cdk9Q99J95 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cdk9Q99J95 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdk9Q99J95 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdk9Q99J95 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdk9Q99J95 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdk9Q99J95 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.33■□□□□ 0.21
Cdk9Q99J95 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Cdk9Q99J95 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Gm10812-201ENSMUST00000099864 546 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms