Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Gm17807-201ENSMUST00000186869 298 ntBASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb22Q91XZ8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Mir6404-201ENSMUST00000183699 94 ntBASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Ank2-226ENSMUST00000189368 339 ntBASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb22Q91XZ8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb22Q91XZ8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Pcdhb22Q91XZ8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb22Q91XZ8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Gm44454-201ENSMUST00000198541 138 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms