Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
StrcQ8VIM6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
StrcQ8VIM6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
StrcQ8VIM6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.26■□□□□ 0.67
StrcQ8VIM6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.26■□□□□ 0.67
StrcQ8VIM6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.26■□□□□ 0.67
StrcQ8VIM6 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.26■□□□□ 0.67
StrcQ8VIM6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
StrcQ8VIM6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Gm12008-201ENSMUST00000117791 755 ntBASIC19.25■□□□□ 0.67
StrcQ8VIM6 Gm13223-201ENSMUST00000118609 747 ntBASIC19.25■□□□□ 0.67
StrcQ8VIM6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.25■□□□□ 0.67
StrcQ8VIM6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.25■□□□□ 0.67
StrcQ8VIM6 Gm9385-201ENSMUST00000117563 472 ntBASIC19.25■□□□□ 0.67
StrcQ8VIM6 Gm16198-201ENSMUST00000118766 670 ntBASIC19.25■□□□□ 0.67
StrcQ8VIM6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.25■□□□□ 0.67
StrcQ8VIM6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.25■□□□□ 0.67
StrcQ8VIM6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
StrcQ8VIM6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.25■□□□□ 0.67
StrcQ8VIM6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
StrcQ8VIM6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
StrcQ8VIM6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
StrcQ8VIM6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.24■□□□□ 0.67
StrcQ8VIM6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
StrcQ8VIM6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.24■□□□□ 0.67
StrcQ8VIM6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.24■□□□□ 0.67
StrcQ8VIM6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
StrcQ8VIM6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
StrcQ8VIM6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
StrcQ8VIM6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
StrcQ8VIM6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.23■□□□□ 0.67
StrcQ8VIM6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Gm22175-201ENSMUST00000175007 78 ntBASIC19.23■□□□□ 0.67
StrcQ8VIM6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.23■□□□□ 0.67
StrcQ8VIM6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
StrcQ8VIM6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Gm38294-201ENSMUST00000192831 381 ntBASIC19.23■□□□□ 0.67
StrcQ8VIM6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
StrcQ8VIM6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.22■□□□□ 0.67
StrcQ8VIM6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.22■□□□□ 0.67
StrcQ8VIM6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Gm7774-201ENSMUST00000200064 533 ntBASIC19.22■□□□□ 0.67
StrcQ8VIM6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
StrcQ8VIM6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms