Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Gm25016-201ENSMUST00000158399 131 ntBASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Gm6623-201ENSMUST00000173570 544 ntBASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HnrnpuQ8VEK3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HnrnpuQ8VEK3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Gm13836-201ENSMUST00000121159 501 ntBASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HnrnpuQ8VEK3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HnrnpuQ8VEK3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HnrnpuQ8VEK3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
HnrnpuQ8VEK3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
HnrnpuQ8VEK3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
HnrnpuQ8VEK3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HnrnpuQ8VEK3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms