Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg1dQ8VE91 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg1dQ8VE91 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg1dQ8VE91 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg1dQ8VE91 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg1dQ8VE91 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg1dQ8VE91 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Gm29707-201ENSMUST00000196325 491 ntBASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg1dQ8VE91 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg1dQ8VE91 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg1dQ8VE91 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg1dQ8VE91 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Retreg1dQ8VE91 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.02■□□□□ 0.16
Retreg1dQ8VE91 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg1dQ8VE91 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.02■□□□□ 0.16
Retreg1dQ8VE91 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg1dQ8VE91 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg1dQ8VE91 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms