Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rprd1aQ8VDS4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Gm28033-201ENSMUST00000184224 96 ntBASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rprd1aQ8VDS4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rprd1aQ8VDS4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Gm13312-201ENSMUST00000119631 718 ntBASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rprd1aQ8VDS4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms