Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdt1Q8R4E9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdt1Q8R4E9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdt1Q8R4E9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdt1Q8R4E9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdt1Q8R4E9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdt1Q8R4E9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdt1Q8R4E9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdt1Q8R4E9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdt1Q8R4E9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdt1Q8R4E9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdt1Q8R4E9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdt1Q8R4E9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Gm18733-201ENSMUST00000173950 856 ntBASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdt1Q8R4E9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdt1Q8R4E9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Gm11452-201ENSMUST00000122376 690 ntBASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms