Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup58Q8R332 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup58Q8R332 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup58Q8R332 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup58Q8R332 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup58Q8R332 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup58Q8R332 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nup58Q8R332 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup58Q8R332 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup58Q8R332 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.38■□□□□ 0.37
Nup58Q8R332 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup58Q8R332 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup58Q8R332 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Nup58Q8R332 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nup58Q8R332 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.38■□□□□ 0.37
Nup58Q8R332 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup58Q8R332 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nup58Q8R332 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup58Q8R332 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.37■□□□□ 0.37
Nup58Q8R332 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup58Q8R332 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.36■□□□□ 0.37
Nup58Q8R332 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.36■□□□□ 0.37
Nup58Q8R332 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup58Q8R332 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup58Q8R332 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.36■□□□□ 0.37
Nup58Q8R332 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup58Q8R332 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup58Q8R332 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup58Q8R332 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup58Q8R332 Gm13186-201ENSMUST00000118031 316 ntBASIC17.36■□□□□ 0.37
Nup58Q8R332 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup58Q8R332 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.36■□□□□ 0.37
Nup58Q8R332 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Nup58Q8R332 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup58Q8R332 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup58Q8R332 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup58Q8R332 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup58Q8R332 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.36■□□□□ 0.37
Nup58Q8R332 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.36■□□□□ 0.37
Nup58Q8R332 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Nup58Q8R332 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Nup58Q8R332 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nup58Q8R332 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nup58Q8R332 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.35■□□□□ 0.37
Nup58Q8R332 Gm6659-201ENSMUST00000174752 547 ntBASIC17.35■□□□□ 0.37
Nup58Q8R332 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.35■□□□□ 0.37
Nup58Q8R332 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.35■□□□□ 0.37
Nup58Q8R332 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.35■□□□□ 0.37
Nup58Q8R332 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.35■□□□□ 0.37
Nup58Q8R332 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nup58Q8R332 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.35■□□□□ 0.37
Nup58Q8R332 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nup58Q8R332 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup58Q8R332 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.35■□□□□ 0.37
Nup58Q8R332 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup58Q8R332 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup58Q8R332 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup58Q8R332 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup58Q8R332 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup58Q8R332 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup58Q8R332 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup58Q8R332 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Nup58Q8R332 Gm2274-201ENSMUST00000184539 609 ntBASIC17.34■□□□□ 0.37
Nup58Q8R332 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup58Q8R332 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nup58Q8R332 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup58Q8R332 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.34■□□□□ 0.37
Nup58Q8R332 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup58Q8R332 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.34■□□□□ 0.37
Nup58Q8R332 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Nup58Q8R332 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nup58Q8R332 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Nup58Q8R332 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nup58Q8R332 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.34■□□□□ 0.37
Nup58Q8R332 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup58Q8R332 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms