Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a1Q8K4Z5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Sf3a1Q8K4Z5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Ank2-226ENSMUST00000189368 339 ntBASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a1Q8K4Z5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Gm27357-201ENSMUST00000183754 135 ntBASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a1Q8K4Z5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms