Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shtn1Q8K2Q9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shtn1Q8K2Q9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shtn1Q8K2Q9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shtn1Q8K2Q9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Shtn1Q8K2Q9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shtn1Q8K2Q9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.05■□□□□ 0.64
Shtn1Q8K2Q9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Gm5682-201ENSMUST00000173402 505 ntBASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Shtn1Q8K2Q9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shtn1Q8K2Q9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shtn1Q8K2Q9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shtn1Q8K2Q9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shtn1Q8K2Q9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shtn1Q8K2Q9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shtn1Q8K2Q9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.02■□□□□ 0.64
Shtn1Q8K2Q9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Shtn1Q8K2Q9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.02■□□□□ 0.64
Shtn1Q8K2Q9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.02■□□□□ 0.64
Shtn1Q8K2Q9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shtn1Q8K2Q9 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.02■□□□□ 0.64
Shtn1Q8K2Q9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shtn1Q8K2Q9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shtn1Q8K2Q9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shtn1Q8K2Q9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.02■□□□□ 0.63
Shtn1Q8K2Q9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Gm25406-201ENSMUST00000157599 105 ntBASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Gm27646-201ENSMUST00000183989 110 ntBASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Shtn1Q8K2Q9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Shtn1Q8K2Q9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19■□□□□ 0.63
Shtn1Q8K2Q9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shtn1Q8K2Q9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Shtn1Q8K2Q9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shtn1Q8K2Q9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shtn1Q8K2Q9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms