Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trpm6Q8CIR4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trpm6Q8CIR4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trpm6Q8CIR4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.21■□□□□ 0.19
Trpm6Q8CIR4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trpm6Q8CIR4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.21■□□□□ 0.19
Trpm6Q8CIR4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trpm6Q8CIR4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.21■□□□□ 0.18
Trpm6Q8CIR4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.21■□□□□ 0.18
Trpm6Q8CIR4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trpm6Q8CIR4 Gm25925-201ENSMUST00000158314 306 ntBASIC16.21■□□□□ 0.18
Trpm6Q8CIR4 Gm27646-201ENSMUST00000183989 110 ntBASIC16.21■□□□□ 0.18
Trpm6Q8CIR4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trpm6Q8CIR4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Trpm6Q8CIR4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trpm6Q8CIR4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Gm11764-201ENSMUST00000120221 623 ntBASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.19■□□□□ 0.18
Trpm6Q8CIR4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Gm7222-201ENSMUST00000117512 906 ntBASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Trpm6Q8CIR4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.17■□□□□ 0.18
Trpm6Q8CIR4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpm6Q8CIR4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpm6Q8CIR4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpm6Q8CIR4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.17■□□□□ 0.18
Trpm6Q8CIR4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms