Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clip4Q8CI96 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Gm26039-201ENSMUST00000158152 144 ntBASIC16.36■□□□□ 0.21
Clip4Q8CI96 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clip4Q8CI96 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.36■□□□□ 0.21
Clip4Q8CI96 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clip4Q8CI96 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.36■□□□□ 0.21
Clip4Q8CI96 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clip4Q8CI96 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Clip4Q8CI96 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clip4Q8CI96 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clip4Q8CI96 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Clip4Q8CI96 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clip4Q8CI96 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Gm25016-201ENSMUST00000158399 131 ntBASIC16.33■□□□□ 0.2
Clip4Q8CI96 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.33■□□□□ 0.2
Clip4Q8CI96 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms