Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc4Q8CG47 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.93■□□□□ 0.78
Smc4Q8CG47 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc4Q8CG47 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc4Q8CG47 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.93■□□□□ 0.78
Smc4Q8CG47 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc4Q8CG47 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.92■□□□□ 0.78
Smc4Q8CG47 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Mir6404-201ENSMUST00000183699 94 ntBASIC19.92■□□□□ 0.78
Smc4Q8CG47 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc4Q8CG47 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Gm25406-201ENSMUST00000157599 105 ntBASIC19.91■□□□□ 0.78
Smc4Q8CG47 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Gm6296-201ENSMUST00000222599 943 ntBASIC19.91■□□□□ 0.78
Smc4Q8CG47 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc4Q8CG47 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Gm12497-201ENSMUST00000138778 237 ntBASIC19.9■□□□□ 0.78
Smc4Q8CG47 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Gm44771-201ENSMUST00000206975 626 ntBASIC19.9■□□□□ 0.78
Smc4Q8CG47 Gm7506-201ENSMUST00000207758 815 ntBASIC19.9■□□□□ 0.78
Smc4Q8CG47 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.9■□□□□ 0.78
Smc4Q8CG47 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smc4Q8CG47 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smc4Q8CG47 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smc4Q8CG47 Gm13216-201ENSMUST00000117145 591 ntBASIC19.89■□□□□ 0.77
Smc4Q8CG47 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.89■□□□□ 0.77
Smc4Q8CG47 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.89■□□□□ 0.77
Smc4Q8CG47 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
Smc4Q8CG47 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc4Q8CG47 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.88■□□□□ 0.77
Smc4Q8CG47 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smc4Q8CG47 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.88■□□□□ 0.77
Smc4Q8CG47 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.88■□□□□ 0.77
Smc4Q8CG47 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.88■□□□□ 0.77
Smc4Q8CG47 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms