Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp44Q8C2S0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.97■□□□□ 0.63
Usp44Q8C2S0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Usp44Q8C2S0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Gm14859-201ENSMUST00000117752 357 ntBASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Ank2-226ENSMUST00000189368 339 ntBASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Usp44Q8C2S0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp44Q8C2S0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms