Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Gm4459-201ENSMUST00000118750 468 ntBASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sh3rf2Q8BZT2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Gm13418-201ENSMUST00000119097 944 ntBASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Gm12497-201ENSMUST00000138778 237 ntBASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Gm4535-201ENSMUST00000182274 558 ntBASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Gm10355-201ENSMUST00000097146 517 ntBASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.39■□□□□ 0.21
Sh3rf2Q8BZT2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Gm25406-201ENSMUST00000157599 105 ntBASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.38■□□□□ 0.21
Sh3rf2Q8BZT2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Gm25990-201ENSMUST00000102440 86 ntBASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Gm18206-201ENSMUST00000207027 926 ntBASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Gm9172-201ENSMUST00000212092 954 ntBASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf2Q8BZT2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Gm8097-201ENSMUST00000117903 829 ntBASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms