Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Gm27704-201ENSMUST00000185094 107 ntBASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Gm37722-201ENSMUST00000193757 208 ntBASIC14.4□□□□□ -0.1
Ube3dQ8BX13 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.4□□□□□ -0.1
Ube3dQ8BX13 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3dQ8BX13 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3dQ8BX13 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Gm11950-201ENSMUST00000121615 838 ntBASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Gm44487-201ENSMUST00000205145 325 ntBASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3dQ8BX13 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms