Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdk5rap1Q8BTW8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm25745-201ENSMUST00000174945 133 ntBASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap1Q8BTW8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdk5rap1Q8BTW8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdk5rap1Q8BTW8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm11452-201ENSMUST00000122376 690 ntBASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm18195-201ENSMUST00000207604 706 ntBASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cdk5rap1Q8BTW8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdk5rap1Q8BTW8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms