Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cpne3Q8BT60 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Gm16061-201ENSMUST00000122167 857 ntBASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne3Q8BT60 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Gm13436-201ENSMUST00000120418 567 ntBASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Gm13474-201ENSMUST00000122466 815 ntBASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne3Q8BT60 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Gm7213-201ENSMUST00000215977 950 ntBASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Gm18115-201ENSMUST00000221209 621 ntBASIC15.65■□□□□ 0.1
Cpne3Q8BT60 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.65■□□□□ 0.1
Cpne3Q8BT60 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms