Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Mir5122-201ENSMUST00000175004 89 ntBASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Gm8520-201ENSMUST00000186517 868 ntBASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Gm7370-201ENSMUST00000219471 767 ntBASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdhr3Q8BL00 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdhr3Q8BL00 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdhr3Q8BL00 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdhr3Q8BL00 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdhr3Q8BL00 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdhr3Q8BL00 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdhr3Q8BL00 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdhr3Q8BL00 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms