Protein–RNA interactions for Protein: Q8BKI2

Tnrc6b, Trinucleotide repeat-containing gene 6B protein, mousemouse

Known RBP Predictions only

Length 1,810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6bQ8BKI2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tnrc6bQ8BKI2 Rarb-207ENSMUST00000225921 2756 ntBASIC21.33■■□□□ 1
Tnrc6bQ8BKI2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Gm45612-201ENSMUST00000211320 160 ntBASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Gm5312-201ENSMUST00000203728 547 ntBASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Gm45747-201ENSMUST00000212203 999 ntBASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6bQ8BKI2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6bQ8BKI2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Gm44335-201ENSMUST00000196879 141 ntBASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Gm44297-201ENSMUST00000198304 141 ntBASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Gm44346-201ENSMUST00000198851 141 ntBASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 AC122024.2-201ENSMUST00000220086 871 ntBASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6bQ8BKI2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 AC159114.1-201ENSMUST00000220349 266 ntBASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 AC155252.2-201ENSMUST00000226946 680 ntBASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6bQ8BKI2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnrc6bQ8BKI2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Tnrc6bQ8BKI2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Tnrc6bQ8BKI2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnrc6bQ8BKI2 Gm13332-201ENSMUST00000120451 1398 ntBASIC21.28■■□□□ 1
Tnrc6bQ8BKI2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tnrc6bQ8BKI2 Gm27301-201ENSMUST00000184012 127 ntBASIC21.28■■□□□ 1
Tnrc6bQ8BKI2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC21.28■■□□□ 1
Tnrc6bQ8BKI2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC21.28■■□□□ 1
Tnrc6bQ8BKI2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms