Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srrm4Q8BKA3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Srrm4Q8BKA3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srrm4Q8BKA3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srrm4Q8BKA3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srrm4Q8BKA3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srrm4Q8BKA3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srrm4Q8BKA3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srrm4Q8BKA3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srrm4Q8BKA3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Gm14859-201ENSMUST00000117752 357 ntBASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Srrm4Q8BKA3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srrm4Q8BKA3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Srrm4Q8BKA3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srrm4Q8BKA3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Srrm4Q8BKA3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srrm4Q8BKA3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.03□□□□□ -0.16
Srrm4Q8BKA3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Srrm4Q8BKA3 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.03□□□□□ -0.16
Srrm4Q8BKA3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srrm4Q8BKA3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srrm4Q8BKA3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms