Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Samm50Q8BGH2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Samm50Q8BGH2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Samm50Q8BGH2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Samm50Q8BGH2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Samm50Q8BGH2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Samm50Q8BGH2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Samm50Q8BGH2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Samm50Q8BGH2 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.02■□□□□ 0.63
Samm50Q8BGH2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Samm50Q8BGH2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Samm50Q8BGH2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.02■□□□□ 0.63
Samm50Q8BGH2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Samm50Q8BGH2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Samm50Q8BGH2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Samm50Q8BGH2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Samm50Q8BGH2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Samm50Q8BGH2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Samm50Q8BGH2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Samm50Q8BGH2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Gm26039-201ENSMUST00000158152 144 ntBASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Samm50Q8BGH2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Samm50Q8BGH2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19■□□□□ 0.63
Samm50Q8BGH2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Gm3272-201ENSMUST00000181181 1229 ntBASIC19■□□□□ 0.63
Samm50Q8BGH2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19■□□□□ 0.63
Samm50Q8BGH2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Gm10566-201ENSMUST00000086739 996 ntBASIC19■□□□□ 0.63
Samm50Q8BGH2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Samm50Q8BGH2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Samm50Q8BGH2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Samm50Q8BGH2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Samm50Q8BGH2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Samm50Q8BGH2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Samm50Q8BGH2 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.99■□□□□ 0.63
Samm50Q8BGH2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Samm50Q8BGH2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Samm50Q8BGH2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Samm50Q8BGH2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.99■□□□□ 0.63
Samm50Q8BGH2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Samm50Q8BGH2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Samm50Q8BGH2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Samm50Q8BGH2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Samm50Q8BGH2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms