Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim62Q80V85 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim62Q80V85 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim62Q80V85 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim62Q80V85 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim62Q80V85 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim62Q80V85 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim62Q80V85 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trim62Q80V85 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim62Q80V85 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trim62Q80V85 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Trim62Q80V85 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim62Q80V85 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim62Q80V85 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trim62Q80V85 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.74■□□□□ 0.27
Trim62Q80V85 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim62Q80V85 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trim62Q80V85 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Trim62Q80V85 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim62Q80V85 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim62Q80V85 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim62Q80V85 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim62Q80V85 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.73■□□□□ 0.27
Trim62Q80V85 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.73■□□□□ 0.27
Trim62Q80V85 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.73■□□□□ 0.27
Trim62Q80V85 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim62Q80V85 Mir6404-201ENSMUST00000183699 94 ntBASIC16.73■□□□□ 0.27
Trim62Q80V85 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.73■□□□□ 0.27
Trim62Q80V85 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim62Q80V85 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim62Q80V85 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim62Q80V85 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim62Q80V85 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.72■□□□□ 0.27
Trim62Q80V85 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Gm12895-201ENSMUST00000122214 226 ntBASIC16.72■□□□□ 0.27
Trim62Q80V85 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim62Q80V85 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim62Q80V85 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim62Q80V85 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim62Q80V85 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Trim62Q80V85 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Trim62Q80V85 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim62Q80V85 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim62Q80V85 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim62Q80V85 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim62Q80V85 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim62Q80V85 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim62Q80V85 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim62Q80V85 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trim62Q80V85 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim62Q80V85 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim62Q80V85 Gm15165-201ENSMUST00000118140 502 ntBASIC16.71■□□□□ 0.27
Trim62Q80V85 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim62Q80V85 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms