Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.29■□□□□ 0.2
Usp8Q80U87 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Usp8Q80U87 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Usp8Q80U87 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Usp8Q80U87 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Usp8Q80U87 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Usp8Q80U87 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.28■□□□□ 0.2
Usp8Q80U87 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Usp8Q80U87 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.28■□□□□ 0.2
Usp8Q80U87 Gm37055-201ENSMUST00000191866 133 ntBASIC16.28■□□□□ 0.2
Usp8Q80U87 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.28■□□□□ 0.2
Usp8Q80U87 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Usp8Q80U87 Gm30025-201ENSMUST00000218555 728 ntBASIC16.28■□□□□ 0.2
Usp8Q80U87 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Usp8Q80U87 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp8Q80U87 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp8Q80U87 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp8Q80U87 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Usp8Q80U87 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.27■□□□□ 0.2
Usp8Q80U87 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Usp8Q80U87 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.27■□□□□ 0.2
Usp8Q80U87 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Usp8Q80U87 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp8Q80U87 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp8Q80U87 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp8Q80U87 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp8Q80U87 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp8Q80U87 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp8Q80U87 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp8Q80U87 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp8Q80U87 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp8Q80U87 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp8Q80U87 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp8Q80U87 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Usp8Q80U87 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp8Q80U87 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp8Q80U87 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp8Q80U87 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp8Q80U87 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Usp8Q80U87 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Usp8Q80U87 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.26■□□□□ 0.19
Usp8Q80U87 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp8Q80U87 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp8Q80U87 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp8Q80U87 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp8Q80U87 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp8Q80U87 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms