Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 Gm14701-201ENSMUST00000117156 348 ntBASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.37■□□□□ 0.53
Ddx55Q6ZPL9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Gm8344-201ENSMUST00000119813 856 ntBASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Gm11025-201ENSMUST00000140773 466 ntBASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Gm17271-201ENSMUST00000165535 355 ntBASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Gm8396-201ENSMUST00000057361 823 ntBASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx55Q6ZPL9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx55Q6ZPL9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms