Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ddx58Q6Q899 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx58Q6Q899 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx58Q6Q899 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx58Q6Q899 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx58Q6Q899 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20■□□□□ 0.79
Ddx58Q6Q899 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ddx58Q6Q899 Mir5131-201ENSMUST00000175426 93 ntBASIC20■□□□□ 0.79
Ddx58Q6Q899 Gm43514-201ENSMUST00000198852 424 ntBASIC20■□□□□ 0.79
Ddx58Q6Q899 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20■□□□□ 0.79
Ddx58Q6Q899 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx58Q6Q899 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx58Q6Q899 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx58Q6Q899 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx58Q6Q899 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx58Q6Q899 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20■□□□□ 0.79
Ddx58Q6Q899 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ddx58Q6Q899 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx58Q6Q899 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Gm11780-201ENSMUST00000136880 516 ntBASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ddx58Q6Q899 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Gm7230-201ENSMUST00000173026 815 ntBASIC19.97■□□□□ 0.79
Ddx58Q6Q899 AW822252-206ENSMUST00000208904 237 ntBASIC19.97■□□□□ 0.79
Ddx58Q6Q899 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ddx58Q6Q899 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx58Q6Q899 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx58Q6Q899 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ddx58Q6Q899 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx58Q6Q899 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx58Q6Q899 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.96■□□□□ 0.79
Ddx58Q6Q899 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx58Q6Q899 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ddx58Q6Q899 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ddx58Q6Q899 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx58Q6Q899 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms