Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Gm43575-201ENSMUST00000196420 516 ntBASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup98Q6PFD9 Gm15358-201ENSMUST00000119249 520 ntBASIC18.97■□□□□ 0.63
Nup98Q6PFD9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nup98Q6PFD9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nup98Q6PFD9 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.97■□□□□ 0.63
Nup98Q6PFD9 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup98Q6PFD9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nup98Q6PFD9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup98Q6PFD9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup98Q6PFD9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Nup98Q6PFD9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.96■□□□□ 0.63
Nup98Q6PFD9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nup98Q6PFD9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup98Q6PFD9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup98Q6PFD9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup98Q6PFD9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup98Q6PFD9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup98Q6PFD9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup98Q6PFD9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.96■□□□□ 0.62
Nup98Q6PFD9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.96■□□□□ 0.62
Nup98Q6PFD9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Mir3113-201ENSMUST00000175478 76 ntBASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Gm45167-201ENSMUST00000208007 322 ntBASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nup98Q6PFD9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.94■□□□□ 0.62
Nup98Q6PFD9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup98Q6PFD9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms