Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Gm10819-201ENSMUST00000099988 561 ntBASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc2Q6PDG5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Smarcc2Q6PDG5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc2Q6PDG5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smarcc2Q6PDG5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smarcc2Q6PDG5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Gm45328-201ENSMUST00000210942 917 ntBASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc2Q6PDG5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms