Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm12644-201ENSMUST00000119935 606 ntBASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.94■□□□□ 0.3
Hmgb4Q6P8W9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb4Q6P8W9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hmgb4Q6P8W9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms