Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smchd1Q6P5D8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Gm27646-201ENSMUST00000183989 110 ntBASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smchd1Q6P5D8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smchd1Q6P5D8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.71■□□□□ 0.42
Smchd1Q6P5D8 Gm43514-201ENSMUST00000198852 424 ntBASIC17.71■□□□□ 0.42
Smchd1Q6P5D8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smchd1Q6P5D8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Gm13418-201ENSMUST00000119097 944 ntBASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Gm5364-201ENSMUST00000216789 889 ntBASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Smchd1Q6P5D8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Gm1401-201ENSMUST00000122048 772 ntBASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.69■□□□□ 0.42
Smchd1Q6P5D8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smchd1Q6P5D8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms