Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.98■□□□□ 0.31
Scube3Q66PY1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Rprl3-201ENSMUST00000157400 290 ntBASIC16.98■□□□□ 0.31
Scube3Q66PY1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Scube3Q66PY1 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC16.98■□□□□ 0.31
Scube3Q66PY1 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.98■□□□□ 0.31
Scube3Q66PY1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scube3Q66PY1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Gm12895-201ENSMUST00000122214 226 ntBASIC16.97■□□□□ 0.31
Scube3Q66PY1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scube3Q66PY1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.96■□□□□ 0.31
Scube3Q66PY1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Scube3Q66PY1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.96■□□□□ 0.31
Scube3Q66PY1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scube3Q66PY1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scube3Q66PY1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms