Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Foxc1Q61572 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.92□□□□□ -0.5
Foxc1Q61572 Gm9013-201ENSMUST00000132939 882 ntBASIC11.92□□□□□ -0.5
Foxc1Q61572 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.92□□□□□ -0.5
Foxc1Q61572 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.92□□□□□ -0.5
Foxc1Q61572 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.92□□□□□ -0.5
Foxc1Q61572 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.92□□□□□ -0.5
Foxc1Q61572 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Foxc1Q61572 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC11.92□□□□□ -0.5
Foxc1Q61572 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Foxc1Q61572 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Foxc1Q61572 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.91□□□□□ -0.5
Foxc1Q61572 Gm13186-201ENSMUST00000118031 316 ntBASIC11.91□□□□□ -0.5
Foxc1Q61572 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.91□□□□□ -0.5
Foxc1Q61572 Gm18115-201ENSMUST00000221209 621 ntBASIC11.91□□□□□ -0.5
Foxc1Q61572 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.91□□□□□ -0.5
Foxc1Q61572 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Foxc1Q61572 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Foxc1Q61572 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.91□□□□□ -0.5
Foxc1Q61572 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Foxc1Q61572 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Foxc1Q61572 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxc1Q61572 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Foxc1Q61572 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC11.9□□□□□ -0.5
Foxc1Q61572 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.9□□□□□ -0.5
Foxc1Q61572 Gm43377-201ENSMUST00000201640 455 ntBASIC11.9□□□□□ -0.5
Foxc1Q61572 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.9□□□□□ -0.5
Foxc1Q61572 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Gm10566-201ENSMUST00000086739 996 ntBASIC11.9□□□□□ -0.5
Foxc1Q61572 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Foxc1Q61572 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxc1Q61572 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms