Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Irf9Q61179 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Irf9Q61179 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Irf9Q61179 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.11■□□□□ 0.81
Irf9Q61179 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Irf9Q61179 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Irf9Q61179 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Irf9Q61179 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Irf9Q61179 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Irf9Q61179 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Irf9Q61179 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Irf9Q61179 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Irf9Q61179 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Irf9Q61179 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Irf9Q61179 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Irf9Q61179 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Irf9Q61179 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Irf9Q61179 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Irf9Q61179 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Irf9Q61179 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Gm11780-201ENSMUST00000136880 516 ntBASIC20.1■□□□□ 0.81
Irf9Q61179 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Irf9Q61179 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.1■□□□□ 0.81
Irf9Q61179 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Irf9Q61179 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Irf9Q61179 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.1■□□□□ 0.81
Irf9Q61179 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Irf9Q61179 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Irf9Q61179 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Gm6443-201ENSMUST00000203599 874 ntBASIC20.09■□□□□ 0.81
Irf9Q61179 AW822252-206ENSMUST00000208904 237 ntBASIC20.09■□□□□ 0.81
Irf9Q61179 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.09■□□□□ 0.81
Irf9Q61179 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.09■□□□□ 0.81
Irf9Q61179 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Irf9Q61179 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Irf9Q61179 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.08■□□□□ 0.81
Irf9Q61179 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Irf9Q61179 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Irf9Q61179 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Irf9Q61179 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Irf9Q61179 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Irf9Q61179 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Irf9Q61179 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Irf9Q61179 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Irf9Q61179 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Irf9Q61179 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.81
Irf9Q61179 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Irf9Q61179 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Irf9Q61179 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Irf9Q61179 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Irf9Q61179 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Irf9Q61179 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Irf9Q61179 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Irf9Q61179 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Irf9Q61179 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Irf9Q61179 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Irf9Q61179 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.07■□□□□ 0.8
Irf9Q61179 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Irf9Q61179 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Irf9Q61179 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.07■□□□□ 0.8
Irf9Q61179 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.07■□□□□ 0.8
Irf9Q61179 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Irf9Q61179 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Irf9Q61179 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Irf9Q61179 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Irf9Q61179 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Irf9Q61179 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Irf9Q61179 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.06■□□□□ 0.8
Irf9Q61179 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.06■□□□□ 0.8
Irf9Q61179 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms