Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atp13a4Q5XF90 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Atp13a4Q5XF90 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Olfr129-201ENSMUST00000122318 993 ntBASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Atp13a4Q5XF90 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atp13a4Q5XF90 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atp13a4Q5XF90 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atp13a4Q5XF90 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atp13a4Q5XF90 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atp13a4Q5XF90 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atp13a4Q5XF90 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.52■□□□□ 0.39
Atp13a4Q5XF90 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atp13a4Q5XF90 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atp13a4Q5XF90 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms