Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Gm37292-201ENSMUST00000192062 758 ntBASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8d-1Q5R1H8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8d-1Q5R1H8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav8d-1Q5R1H8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms