Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Gm15693-201ENSMUST00000120470 637 ntBASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col27a1Q5QNQ9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Gm16198-201ENSMUST00000118766 670 ntBASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Gm12151-201ENSMUST00000121374 290 ntBASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col27a1Q5QNQ9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col27a1Q5QNQ9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Gm8969-201ENSMUST00000199694 526 ntBASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms