Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.72■□□□□ 0.43
Scarf1Q5ND28 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarf1Q5ND28 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Mir6404-201ENSMUST00000183699 94 ntBASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Gm34391-201ENSMUST00000203706 907 ntBASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Scarf1Q5ND28 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scarf1Q5ND28 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Scarf1Q5ND28 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Gm15165-201ENSMUST00000118140 502 ntBASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarf1Q5ND28 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scarf1Q5ND28 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scarf1Q5ND28 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scarf1Q5ND28 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.68■□□□□ 0.42
Scarf1Q5ND28 Gm11434-201ENSMUST00000122379 629 ntBASIC17.68■□□□□ 0.42
Scarf1Q5ND28 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.68■□□□□ 0.42
Scarf1Q5ND28 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.68■□□□□ 0.42
Scarf1Q5ND28 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms