Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shank3Q4ACU6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Gm43474-201ENSMUST00000196415 774 ntBASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Gm20949-201ENSMUST00000206478 952 ntBASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Gm18489-201ENSMUST00000172565 551 ntBASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Gm7787-201ENSMUST00000216858 688 ntBASIC20.07■□□□□ 0.8
Shank3Q4ACU6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Shank3Q4ACU6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Gm13365-201ENSMUST00000121188 973 ntBASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.06■□□□□ 0.8
Shank3Q4ACU6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.05■□□□□ 0.8
Shank3Q4ACU6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Shank3Q4ACU6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shank3Q4ACU6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.03■□□□□ 0.8
Shank3Q4ACU6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Thap2-203ENSMUST00000218989 527 ntBASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.03■□□□□ 0.8
Shank3Q4ACU6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shank3Q4ACU6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shank3Q4ACU6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shank3Q4ACU6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shank3Q4ACU6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Shank3Q4ACU6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.02■□□□□ 0.79
Shank3Q4ACU6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Shank3Q4ACU6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Shank3Q4ACU6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.02■□□□□ 0.79
Shank3Q4ACU6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms