Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Gm11355-201ENSMUST00000121120 306 ntBASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Gm36967-201ENSMUST00000193814 266 ntBASIC15.29■□□□□ 0.04
Brf2Q3UAW9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.29■□□□□ 0.04
Brf2Q3UAW9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.28■□□□□ 0.04
Brf2Q3UAW9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Gm18032-201ENSMUST00000222541 538 ntBASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf2Q3UAW9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 Gm9987-201ENSMUST00000069768 567 ntBASIC15.27■□□□□ 0.04
Brf2Q3UAW9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf2Q3UAW9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Brf2Q3UAW9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brf2Q3UAW9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brf2Q3UAW9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Brf2Q3UAW9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brf2Q3UAW9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.27■□□□□ 0.03
Brf2Q3UAW9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brf2Q3UAW9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brf2Q3UAW9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Gm10013-201ENSMUST00000106074 672 ntBASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf2Q3UAW9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms