Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Gm7638-201ENSMUST00000121348 967 ntBASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Gm9731-201ENSMUST00000209480 747 ntBASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fndc4Q3TR08 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fndc4Q3TR08 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.83□□□□□ -0.19
Fndc4Q3TR08 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Fndc4Q3TR08 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.83□□□□□ -0.19
Fndc4Q3TR08 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
Fndc4Q3TR08 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Fndc4Q3TR08 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Gm37055-201ENSMUST00000191866 133 ntBASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.83□□□□□ -0.2
Fndc4Q3TR08 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fndc4Q3TR08 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms