Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Gm12895-201ENSMUST00000122214 226 ntBASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Gm43347-201ENSMUST00000200226 580 ntBASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Khdc4Q3TCX3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Khdc4Q3TCX3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Khdc4Q3TCX3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 Gm27459-201ENSMUST00000184860 107 ntBASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Khdc4Q3TCX3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Khdc4Q3TCX3 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.36■□□□□ 0.05
Khdc4Q3TCX3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Khdc4Q3TCX3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Khdc4Q3TCX3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Khdc4Q3TCX3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms