Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cul4aQ3TCH7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Gm27011-201ENSMUST00000182352 972 ntBASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cul4aQ3TCH7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cul4aQ3TCH7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cul4aQ3TCH7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Cul4aQ3TCH7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cul4aQ3TCH7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cul4aQ3TCH7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Cul4aQ3TCH7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cul4aQ3TCH7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Gm13559-201ENSMUST00000120476 863 ntBASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Gm26039-201ENSMUST00000158152 144 ntBASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Gm37055-201ENSMUST00000191866 133 ntBASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cul4aQ3TCH7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cul4aQ3TCH7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cul4aQ3TCH7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cul4aQ3TCH7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cul4aQ3TCH7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cul4aQ3TCH7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cul4aQ3TCH7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cul4aQ3TCH7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms